STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW32620.1Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (309 aa)    
Predicted Functional Partners:
SEW32612.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  
 
  0.919
SEW32598.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
 
   0.826
SEV96650.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.824
SEW42968.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.824
SEW32636.1
Threonine/homoserine/homoserine lactone efflux protein.
 
     0.803
SEW32605.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.786
SEW32629.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
      0.773
SEV91693.1
Glyoxylate/hydroxypyruvate reductase A.
 
  
 
0.750
SEW04656.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.738
SEW18301.1
Hydroxypyruvate reductase.
 
 
 0.732
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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