STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW37881.1Transcriptional regulator, IclR family. (268 aa)    
Predicted Functional Partners:
SEW37930.1
Sugar lactone lactonase YvrE.
      0.930
SEW37889.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
    0.807
SEW37871.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
       0.773
SEW47275.1
Inhibitor of KinA.
  
    0.773
SEW47271.1
Allophanate hydrolase.
  
    0.684
SEW37903.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.615
SEW15233.1
Indolepyruvate ferredoxin oxidoreductase.
    
  0.609
SEW37896.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.605
SEW37909.1
Alpha-galactosidase.
 
     0.581
SEW37921.1
2-keto-3-deoxy-phosphogalactonate aldolase.
 
   
 0.562
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.