STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW37938.1Beta-galactosidase. (634 aa)    
Predicted Functional Partners:
SEW37909.1
Alpha-galactosidase.
 
  
 0.990
SEW37943.1
Aldose 1-epimerase.
  
 
 0.967
SEW37903.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
    0.903
SEW37889.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
   
 0.856
SEW37896.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
    0.854
SEW41712.1
D-galactose 1-dehydrogenase.
   
 
  0.825
SEW37930.1
Sugar lactone lactonase YvrE.
 
     0.809
SEW37913.1
2-dehydro-3-deoxygalactonokinase.
 
     0.797
SEW37951.1
malonyl-CoA/methylmalonyl-CoA synthetase.
   
   0.788
SEW37921.1
2-keto-3-deoxy-phosphogalactonate aldolase.
       0.770
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.