STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW39385.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. (401 aa)    
Predicted Functional Partners:
SEV93499.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.989
SEV93534.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
 0.975
SEW40799.1
Formate dehydrogenase major subunit.
 
 0.955
SEW19387.1
Hypothetical protein.
  
 0.924
SEW31245.1
Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.910
SEW39392.1
16S rRNA (guanine966-N2)-methyltransferase.
       0.814
SEW22139.1
Ferredoxin, 2Fe-2S.
 
 
 0.807
SEW31229.1
Respiratory nitrate reductase beta subunit.
  
 
 0.803
SEW39400.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
       0.788
SEW25305.1
Reductive dehalogenase.
  
 
 0.776
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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