STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW41978.1Regulatory protein, luxR family. (350 aa)    
Predicted Functional Partners:
SEW41986.1
Hypothetical protein.
       0.773
SEW03530.1
N-acyl-L-homoserine lactone synthetase.
  
 
 0.547
SEW28291.1
N-acyl-L-homoserine lactone synthetase.
  
 
 0.547
SEW47327.1
N-acyl-L-homoserine lactone synthetase; Belongs to the autoinducer synthase family.
  
 
 0.547
SEW41993.1
Hemolysin-type calcium-binding repeat-containing protein.
       0.463
SEW03506.1
Transcriptional regulator, LuxR family.
   
  0.421
SEW05120.1
Two component transcriptional regulator, LuxR family.
   
  0.421
SEW40539.1
Two component transcriptional regulator, LuxR family.
   
  0.421
SEW41972.1
Regulatory protein, luxR family.
   
  0.421
SEW42690.1
Response regulator receiver domain-containing protein.
   
  0.421
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.