STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW43833.1Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (333 aa)    
Predicted Functional Partners:
SEW43823.1
Protoporphyrin IX magnesium-chelatase.
 0.999
SEW43717.1
Mg-protoporphyrin IX methyltransferase.
 
 
 0.983
SEW43700.1
Cobaltochelatase CobN subunit.
 
 
 0.981
SEW38566.1
Cobaltochelatase CobN subunit.
 
 
 0.980
SEW15775.1
Ca-activated chloride channel family protein.
  
 0.966
SEW43813.1
Magnesium chelatase accessory protein.
 
    0.952
SEW43844.1
Spheroidene monooxygenase.
  
  
 0.931
SEW41505.1
Geranylgeranyl reductase.
 
  
 0.929
SEW41487.1
Chlorophyll synthase.
 
  
 0.912
SEW43862.1
Phytoene synthase.
 
  
 0.900
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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