STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW44876.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
SEW44868.1
Hypothetical protein.
 
     0.856
rnhB
RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.816
SEW44858.1
Hypothetical protein.
 
     0.765
SEV89115.1
Hypothetical protein.
  
     0.615
SEW44889.1
Modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
       0.582
SEW46460.1
Hypothetical protein.
  
     0.535
SEW30382.1
Protein of unknown function.
  
     0.476
SEW16958.1
Hypothetical protein.
  
     0.460
SEW21949.1
Hypothetical protein.
  
     0.458
SEW07155.1
Hypothetical protein.
  
     0.441
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.