STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW45474.1Selenophosphate synthase. (720 aa)    
Predicted Functional Partners:
SEW45478.1
tRNA 2-selenouridine synthase; Belongs to the SelU family.
   
 0.914
SEV94461.1
Thioredoxin reductase (NADPH).
    
 0.911
SEW43308.1
Thioredoxin; Belongs to the thioredoxin family.
   
 0.901
SEW45730.1
Thioredoxin.
   
 0.901
SEV99507.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
     
 0.895
SEW41331.1
Hypothetical protein.
   
 0.871
SEW42117.1
Multisubunit potassium/proton antiporter, PhaA subunit (TC 2.A.63.1.1)/multisubunit potassium/proton antiporter, PhaB subunit (TC 2.A.63.1.1).
  
 
 0.853
SEW19669.1
Cytochrome c.
  
 
 0.831
SEW03244.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
    
 0.828
SEW38843.1
Thiol-disulfide isomerase or thioredoxin.
    
 0.828
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.