STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW45688.1Predicted dehydrogenase. (373 aa)    
Predicted Functional Partners:
SEW45682.1
Sugar phosphate isomerase/epimerase.
 
  0.990
SEW45655.1
Glucose/mannose transport system permease protein.
 
     0.898
SEW45676.1
Beta-mannosidase.
 
  
  0.896
SEW45662.1
Glucose/mannose transport system permease protein.
 
     0.890
SEW23822.1
Hypothetical protein.
  
  0.886
SEW45647.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
     0.853
SEW45669.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
     0.802
SEW41478.1
Trehalose utilization protein.
 
    0.734
SEW29219.1
2-keto-myo-inositol dehydratase.
  
 
  0.661
SEW29155.1
5-deoxy-glucuronate isomerase.
 
  
 0.642
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.