STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW46448.1Putative hemolysin. (292 aa)    
Predicted Functional Partners:
SEW46420.1
Two-component system, OmpR family, sensor histidine kinase ChvG.
 
     0.738
SEW46442.1
Phosphocarrier protein.
       0.694
SEW46437.1
PTS system, mannose-specific IIA component.
       0.692
SEW46432.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
       0.690
SEW46426.1
Hpr(Ser) kinase/phosphatase.
       0.687
SEW46415.1
Two component transcriptional regulator, winged helix family.
       0.652
SEW22733.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.518
SEW01547.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.511
SEW17428.1
Paraquat-inducible protein A.
  
     0.473
SEW11231.1
Lyso-ornithine lipid acyltransferase.
  
  
 0.462
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.