STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW47099.1Threonine dehydrogenase. (326 aa)    
Predicted Functional Partners:
xylB
Xylulokinase.
 
 
 0.754
hisD-3
Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
     0.736
SEW25305.1
Reductive dehalogenase.
  
 
 0.724
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
     
 0.721
SEV99507.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
    
 0.699
SEW18084.1
Hypothetical protein.
    
  0.697
SEW25143.1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.690
SEW47110.1
Nucleotide-binding universal stress protein, UspA family.
       0.678
SEW47294.1
Threonine dehydratase.
   
 
  0.665
SEW04656.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.641
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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