STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW47415.1Protein of unknown function. (179 aa)    
Predicted Functional Partners:
SEW45354.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
 
 0.892
SEW45346.1
Hypothetical protein.
 
  
 0.858
SEW45336.1
Hypothetical protein.
 
   
 0.832
SEW45372.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.795
SEW39346.1
HlyD family secretion protein.
  
 0.772
SEW47411.1
Protein of unknown function.
       0.642
SEW47418.1
Alpha/beta hydrolase of unknown function.
       0.572
SEV93213.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.568
SEW26478.1
HlyD family secretion protein.
  
 0.568
SEW11752.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.556
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.