STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0034PFAM: transglutaminase domain protein; KEGG: pol:Bpro_0068 transglutaminase-like. (284 aa)    
Predicted Functional Partners:
Pnap_1064
PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: dar:Daro_3009 protein of unknown function DUF403.
 
  
 0.857
Pnap_1206
PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: pol:Bpro_3157 protein of unknown function DUF404.
 
    0.805
Pnap_1207
PFAM: protein of unknown function DUF403; KEGG: pol:Bpro_3156 protein of unknown function DUF403.
 
  
 0.795
Pnap_1061
PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rpc:RPC_0967 transglutaminase-like.
 
     0.777
Pnap_1065
PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rru:Rru_A2558 transglutaminase-like.
 
     0.676
Pnap_0032
PFAM: protein of unknown function DUF1328; KEGG: pol:Bpro_0066 protein of unknown function DUF1328.
       0.574
Pnap_0033
KEGG: pol:Bpro_0067 hypothetical protein.
       0.574
Pnap_1358
PFAM: 20S proteasome, A and B subunits; KEGG: pol:Bpro_3338 20S proteasome, A and B subunits.
 
    0.533
Pnap_1062
KEGG: rba:RB2398 hypothetical protein.
  
     0.414
Pnap_2596
KEGG: sde:Sde_0641 hypothetical protein.
  
     0.403
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.