STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0049PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; KEGG: rfr:Rfer_2850 aldehyde ferredoxin oxidoreductase. (615 aa)    
Predicted Functional Partners:
Pnap_0048
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rfr:Rfer_2851 4Fe-4S ferredoxin, iron-sulfur binding.
 
 0.988
Pnap_1018
Glycerate 2-kinase; PFAM: MOFRL domain protein; KEGG: pol:Bpro_1434 hydroxypyruvate reductase.
  
  
  0.912
Pnap_0051
PFAM: thiamineS protein; KEGG: rfr:Rfer_2848 thiamineS.
 
   
 0.908
Pnap_0050
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_2849 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.896
Pnap_0835
Formate dehydrogenase beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pol:Bpro_0938 4Fe-4S ferredoxin, iron-sulfur binding.
 
 
 0.833
Pnap_1511
KEGG: pol:Bpro_1760 hypothetical protein.
 
   
 0.786
Pnap_1509
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1758 binding-protein-dependent transport systems inner membrane component.
 
   
 0.712
Pnap_1508
PFAM: regulatory protein, LysR; KEGG: pol:Bpro_1757 transcriptional regulator of molybdate metabolism, LysR family.
 
   
 0.697
Pnap_0052
KEGG: rfr:Rfer_2847 hypothetical protein.
       0.595
Pnap_3887
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pol:Bpro_4647 pyruvate ferredoxin/flavodoxin oxidoreductase.
   
  
 0.552
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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