STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0067PFAM: protein of unknown function DUF1234; KEGG: pol:Bpro_0077 protein of unknown function DUF1234. (180 aa)    
Predicted Functional Partners:
Pnap_0066
Chromosome segregation ATPase; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pol:Bpro_0076 cobyrinic acid a,c-diamide synthase.
       0.641
Pnap_0068
Chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: pol:Bpro_0078 ParB-like partition proteins; Belongs to the ParB family.
       0.622
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
       0.537
Pnap_0065
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_0075 lysine exporter protein (LysE/YggA).
       0.448
mnmG
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.446
Pnap_1795
KEGG: pol:Bpro_2651 putative heat shock protein.
  
     0.410
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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