STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0130PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_0192 major facilitator superfamily MFS_1. (426 aa)    
Predicted Functional Partners:
Pnap_0129
PFAM: protein of unknown function DUF6, transmembrane; KEGG: pol:Bpro_0191 protein of unknown function DUF6, transmembrane.
       0.789
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.676
Pnap_0904
KEGG: pol:Bpro_1298 hypothetical protein.
  
     0.673
Pnap_3631
KEGG: pol:Bpro_4435 putative proline rich signal peptide protein.
  
     0.642
Pnap_2782
KEGG: pol:Bpro_1805 putative transmembrane protein.
  
     0.613
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.611
Pnap_3352
KEGG: pol:Bpro_1138 CheW-like protein.
  
     0.596
Pnap_2924
Cell division and transport-associated protein TolA; TIGRFAM: TonB family protein; PFAM: TolA family protein; KEGG: pol:Bpro_2892 TonB-like; TC 2.C.1.2.1.
  
   
 0.574
Pnap_3062
KEGG: pol:Bpro_3636 putative transmembrane protein.
  
     0.564
Pnap_0128
PFAM: glutathione peroxidase; KEGG: pol:Bpro_0190 glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.559
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.