STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0185KEGG: pol:Bpro_0233 putative lipoprotein. (234 aa)    
Predicted Functional Partners:
Pnap_0184
PFAM: Mammalian cell entry related domain protein; KEGG: pol:Bpro_0232 mammalian cell entry related.
   0.978
Pnap_0182
PFAM: protein of unknown function DUF140; KEGG: pol:Bpro_0230 protein of unknown function DUF140.
 
  
 0.942
Pnap_0183
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0231 ABC transporter related.
 
    0.934
Pnap_1828
KEGG: bxe:Bxe_B0552 hypothetical protein.
  
     0.588
Pnap_0181
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bxe:Bxe_A0014 transcriptional regulator, LysR family.
 
     0.568
Pnap_0885
KEGG: pol:Bpro_1252 hypothetical protein.
  
     0.552
Pnap_0301
KEGG: pol:Bpro_0444 hypothetical protein.
  
     0.541
Pnap_1153
PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_3224 protein of unknown function DUF214.
  
     0.541
Pnap_3897
KEGG: pol:Bpro_4655 hypothetical protein.
  
     0.524
Pnap_0881
KEGG: pol:Bpro_1248 hypothetical protein.
  
     0.513
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.