STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0306PFAM: domain of unknown function DUF1745; KEGG: pol:Bpro_0450 hypothetical protein. (447 aa)    
Predicted Functional Partners:
Pnap_0305
KEGG: pol:Bpro_0449 hypothetical protein.
       0.674
Pnap_2903
KEGG: pol:Bpro_2871 hypothetical protein.
  
     0.674
Pnap_3087
PFAM: HemY domain protein; KEGG: pol:Bpro_3661 putative porphyrin biosynthesis related protein.
  
     0.540
Pnap_0191
PFAM: Mg2+ transporter protein, CorA family protein; KEGG: pol:Bpro_0244 Mg2+ transporter protein, CorA-like.
  
     0.534
Pnap_3883
KEGG: pol:Bpro_4643 protein of unknown function DUF1631.
  
     0.531
Pnap_0304
Hypothetical protein.
       0.451
Pnap_0301
KEGG: pol:Bpro_0444 hypothetical protein.
 
     0.445
Pnap_1994
Putative adenylate/guanylate cyclase; PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: pol:Bpro_2451 putative adenylate/guanylate cyclase.
  
     0.442
Pnap_3957
PFAM: regulatory protein, MarR; KEGG: pol:Bpro_4686 transcriptional regulator, MarR family.
  
     0.435
Pnap_0376
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: pol:Bpro_4257 thiol-disulfide interchange protein DsbD-like.
  
     0.427
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.