STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0309PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pol:Bpro_0457 phospholipid/glycerol acyltransferase. (658 aa)    
Predicted Functional Partners:
Pnap_3797
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_4543 AMP-dependent synthetase and ligase.
 
 
 0.921
Pnap_2870
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_2094 AMP-dependent synthetase and ligase.
  
 
 0.909
Pnap_0470
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_4161 AMP-dependent synthetase and ligase.
  
 
 0.908
Pnap_3621
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_0589 benzoate-CoA ligase family.
    
 0.902
Pnap_1837
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_2579 AMP-dependent synthetase and ligase.
  
 
 0.884
Pnap_2126
PFAM: AMP-dependent synthetase and ligase; KEGG: rpd:RPD_1544 AMP-dependent synthetase and ligase.
  
 
 0.873
Pnap_0308
KEGG: pol:Bpro_0456 hypothetical protein.
 
     0.824
Pnap_2948
TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_1624 benzoate-CoA ligase family.
    
 0.762
Pnap_0307
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: pol:Bpro_0454 transcriptional regulator, XRE family.
 
     0.623
Pnap_1168
PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr1288 probable long-chain-fatty-acid-CoA ligase.
    
 0.623
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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