STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0390KEGG: rfr:Rfer_3010 hypothetical protein. (152 aa)    
Predicted Functional Partners:
groL1
Thermosome subunit; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.704
Pnap_0388
Hypothetical protein; KEGG: ilo:IL0085 uncharacterized conserved coiled coil protein.
       0.661
Pnap_0391
PFAM: UspA domain protein; KEGG: rpa:RPA3434 universal stress protein (Usp).
       0.610
Pnap_2185
PFAM: dienelactone hydrolase; KEGG: pol:Bpro_2392 phosphoribosyltransferase.
 
     0.472
Pnap_0387
PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pol:Bpro_4256 radical SAM.
       0.445
Pnap_2186
Erythromycin esterase; PFAM: phosphoribosyltransferase; Erythromycin esterase; KEGG: pol:Bpro_2391 erythromycin esterase.
 
     0.433
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.