STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0428Hypothetical protein; KEGG: nha:Nham_3929 putative transposase. (162 aa)    
Predicted Functional Partners:
Pnap_2901
Transposase; KEGG: mma:MM3344 transposase.
  
     0.493
Pnap_2997
Transposase; KEGG: mma:MM3344 transposase.
  
     0.493
Pnap_4008
Transposase; KEGG: mma:MM3344 transposase.
  
     0.493
Pnap_1211
KEGG: tdn:Tmden_0240 conserved hypothetical protein, putative DNA helicase.
  
    0.487
Pnap_2899
KEGG: eba:p1B295 N6 adenine-specific DNA methyltransferase protein, N12 class.
  
  
 0.476
Pnap_2902
KEGG: eba:p1B295 N6 adenine-specific DNA methyltransferase protein, N12 class.
  
  
 0.476
Pnap_0427
PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_C0485 putative transposase IS116/IS110/IS902.
       0.464
Pnap_1743
Transposase; KEGG: eba:p2A365 transposase, fragment.
  
     0.460
Pnap_3633
Transposase; KEGG: eba:p2A365 transposase, fragment.
  
     0.460
Pnap_2468
PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_3613 transposase, IS21 family.
  
     0.437
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.