STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0433KEGG: pol:Bpro_4223 hypothetical protein. (185 aa)    
Predicted Functional Partners:
Pnap_0434
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: pol:Bpro_4222 glucose-methanol-choline oxidoreductase.
  
 0.986
Pnap_0435
KEGG: pol:Bpro_4221 putative lipase transmembrane protein.
       0.673
Pnap_0431
PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_4226 beta-lactamase-like.
       0.565
Pnap_0432
KEGG: pol:Bpro_4224 hypothetical protein.
       0.565
Pnap_1008
KEGG: pol:Bpro_1418 hypothetical protein.
  
     0.422
Pnap_1007
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1417 ABC transporter related.
  
     0.421
Pnap_1074
PFAM: alpha/beta hydrolase fold; KEGG: pol:Bpro_1589 alpha/beta hydrolase fold.
  
     0.405
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.