STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0473PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_4159 enoyl-CoA hydratase/isomerase. (260 aa)    
Predicted Functional Partners:
Pnap_0471
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: pol:Bpro_4160 propionyl-CoA carboxylase.
 0.994
Pnap_1123
hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: reu:Reut_C6248 pyruvate carboxyltransferase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 0.993
Pnap_3506
hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_4037 pyruvate carboxyltransferase.
 0.993
Pnap_0477
hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_4155 pyruvate carboxyltransferase.
 0.992
Pnap_0475
3-methylcrotonoyl-CoA carboxylase, alpha subunit; PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: pol:Bpro_4157 carbamoyl-phosphate synthase L chain, ATP-binding.
 0.982
Pnap_2871
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_2093 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 
0.924
Pnap_0470
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_4161 AMP-dependent synthetase and ligase.
 
 
 0.815
Pnap_0472
PFAM: DinB family protein; KEGG: sme:SMc00593 hypothetical protein.
       0.787
Pnap_0474
KEGG: pol:Bpro_4158 putative transmembrane protein.
       0.736
Pnap_1073
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: pfl:PFL_3251 sensor histidine kinase/response regulator.
    
 
 0.725
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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