STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0487Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_4140 extracellular ligand-binding receptor; TC 3.A.1.4.-. (367 aa)    
Predicted Functional Partners:
Pnap_2208
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: pol:Bpro_2250 twin-arginine translocation pathway signal; TC 3.A.1.4.-.
  
     0.731
Pnap_3519
Branched-chain amino acid transport system ATP-binding protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3708 ABC branched chain amino acid family transporter, fused ATPase and inner membrane subunit; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.610
Pnap_0802
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_0267 ABC transporter related; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.604
Pnap_2713
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bpa:BPP2196 putative ABC transport system, membrane protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.593
Pnap_3520
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A3707 ABC branched chain amino acid family transporter, inner membrane subunit; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.568
Pnap_1616
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; KEGG: pol:Bpro_3084 inner-membrane translocator; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.561
Pnap_3352
KEGG: pol:Bpro_1138 CheW-like protein.
  
 
 
 0.554
Pnap_1652
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: pol:Bpro_1850 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 0.545
Pnap_2194
DNA helicase/exodeoxyribonuclease V, subunit B; KEGG: pol:Bpro_2264 RecB family exonuclease-like.
  
     0.541
Pnap_3207
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: pol:Bpro_3795 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 0.521
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.