STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0568PFAM: acriflavin resistance protein; KEGG: rso:RS02154 probable transport transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1065 aa)    
Predicted Functional Partners:
Pnap_0567
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS02155 putative transport transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.980
Pnap_0566
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS02156 putative outer membrane drug efflux lipoprotein.
 
 0.837
Pnap_2591
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_2826 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.755
Pnap_0575
PFAM: protein of unknown function DUF1549; KEGG: rba:RB2845 hypothetical protein-transmembrane prediction.
 
     0.588
Pnap_0574
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_1146 protein of unknown function DUF1501.
 
     0.578
Pnap_2827
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bte:BTH_II0059 efflux transporter, RND family, MFP subunit, putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.577
Pnap_2968
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS03087 putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.570
Pnap_2960
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_2027 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.538
Pnap_3901
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rfr:Rfer_4105 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.532
Pnap_0569
PFAM: cytochrome c, class II; KEGG: mag:amb0751 cytochrome c' precursor.
 
     0.511
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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