STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0573Hypothetical protein. (137 aa)    
Predicted Functional Partners:
Pnap_0572
PFAM: cytochrome c, class I; KEGG: sdn:Sden_3622 cytochrome c, class I.
       0.743
Pnap_0574
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_1146 protein of unknown function DUF1501.
       0.702
Pnap_0571
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bte:BTH_II0300 bcp.
       0.662
Pnap_0575
PFAM: protein of unknown function DUF1549; KEGG: rba:RB2845 hypothetical protein-transmembrane prediction.
       0.595
Pnap_0570
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rba:RB1022 gluconolactonase.
       0.583
Pnap_0569
PFAM: cytochrome c, class II; KEGG: mag:amb0751 cytochrome c' precursor.
       0.446
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.