STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0581KEGG: bja:bll5801 hypothetical protein. (248 aa)    
Predicted Functional Partners:
Pnap_0580
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2157 putative ABC sulfate ester transporter, ATPase subunit.
       0.574
Pnap_0240
PFAM: protein of unknown function DUF6, transmembrane; KEGG: pol:Bpro_0311 protein of unknown function DUF6, transmembrane.
  
     0.467
Pnap_0464
PFAM: protein of unknown function DUF1326; KEGG: mlo:mll4476 hypothetical protein.
  
     0.467
Pnap_0579
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0132 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
       0.449
Pnap_0465
KEGG: pol:Bpro_1844 hypothetical protein.
  
     0.443
Pnap_1513
PFAM: nuclear export factor GLE1; KEGG: pol:Bpro_1762 nuclear export factor GLE1.
  
     0.431
Pnap_0578
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2062 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
       0.424
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.