STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0690KEGG: pol:Bpro_0798 anti-sigma-factor antagonist (STAS) domain protein. (97 aa)    
Predicted Functional Partners:
Pnap_0689
PFAM: toluene tolerance family protein; KEGG: pol:Bpro_0797 toluene tolerance.
  
 
 0.983
Pnap_0687
PFAM: Mammalian cell entry related domain protein; KEGG: pol:Bpro_0795 mammalian cell entry related.
  
 0.937
Pnap_0685
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_2935 ABC transporter related.
  
 0.922
Pnap_0686
PFAM: protein of unknown function DUF140; KEGG: rfr:Rfer_2936 protein of unknown function DUF140.
  
 0.910
Pnap_0183
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0231 ABC transporter related.
  
 0.880
Pnap_0184
PFAM: Mammalian cell entry related domain protein; KEGG: pol:Bpro_0232 mammalian cell entry related.
  
 0.864
Pnap_1790
PFAM: Mammalian cell entry related domain protein; KEGG: pol:Bpro_2658 ABC-type transport system periplasmic component.
  
 0.864
Pnap_0182
PFAM: protein of unknown function DUF140; KEGG: pol:Bpro_0230 protein of unknown function DUF140.
  
 0.862
Pnap_1789
KEGG: pol:Bpro_2659 ABC-type transport system ipermease component.
  
 0.857
Pnap_0688
PFAM: VacJ family lipoprotein; KEGG: pol:Bpro_0796 VacJ-like lipoprotein.
     
 0.610
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.