STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0719PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2207 ABC efflux transporter, ATP-binding protein. (247 aa)    
Predicted Functional Partners:
Pnap_0723
PFAM: ABC-2 type transporter; KEGG: sil:SPO1510 efflux ABC transporter, permease protein.
 
  
 0.922
Pnap_0722
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: pfl:PFL_2209 hypothetical protein; TC 3.A.1.4.-.
 
  
 0.880
Pnap_0721
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bja:blr6189 hypothetical protein.
 
  
 0.879
Pnap_1653
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1851 ABC transporter related; TC 3.A.1.4.-.
    
0.830
Pnap_2954
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_0210 ABC transporter related; TC 3.A.1.4.-.
 
    
0.778
Pnap_3832
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01528 putative dipeptide transport ATP-binding ABC transporter protein.
    
0.761
Pnap_0726
PFAM: Pyrrolo-quinoline quinone; KEGG: reu:Reut_A1784 pyrrolo-quinoline quinone.
 
    0.752
Pnap_0725
PFAM: beta-lactamase domain protein; KEGG: pfl:PFL_2220 hydrolase, putative.
 
   0.692
Pnap_0724
KEGG: dar:Daro_1025 hypothetical protein.
 
     0.679
Pnap_3518
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3709 ABC branched chain amino acid family transporter, ATPase subunit; TC 3.A.1.4.-.
 
     
0.672
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.