STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0724KEGG: dar:Daro_1025 hypothetical protein. (271 aa)    
Predicted Functional Partners:
Pnap_1669
Sulfur compound chelating protein SoxZ; KEGG: pol:Bpro_2628 hypothetical protein.
 
 
 0.983
Pnap_0725
PFAM: beta-lactamase domain protein; KEGG: pfl:PFL_2220 hydrolase, putative.
 
     0.950
Pnap_2692
Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein; PFAM: oxidoreductase, molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: reu:Reut_A3083 twin-arginine translocation pathway signal.
    
 0.912
Pnap_0722
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: pfl:PFL_2209 hypothetical protein; TC 3.A.1.4.-.
 
     0.911
Pnap_1496
PFAM: Rhodanese domain protein; KEGG: pol:Bpro_1742 3-mercaptopyruvate sulfurtransferase.
    
 0.910
Pnap_0721
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bja:blr6189 hypothetical protein.
 
     0.909
Pnap_2431
KEGG: pol:Bpro_2335 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding.
     
 0.909
Pnap_2430
PFAM: phosphoadenosine phosphosulfate reductase; KEGG: pol:Bpro_2336 sulfate adenylyltransferase.
     
 0.908
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
     
 0.904
Pnap_0563
TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: pol:Bpro_2345 thiosulphate-binding protein.
     
 0.900
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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