STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0736KEGG: reu:Reut_A1777 cytochrome c-type protein. (173 aa)    
Predicted Functional Partners:
Pnap_0737
Amino acid ABC transporter substrate-binding protein, PAAT family; SMART: extracellular solute-binding protein, family 3; KEGG: reu:Reut_A1776 extracellular solute-binding protein, family 3; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 
   
 0.900
Pnap_0726
PFAM: Pyrrolo-quinoline quinone; KEGG: reu:Reut_A1784 pyrrolo-quinoline quinone.
 
  
 0.858
Pnap_0721
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bja:blr6189 hypothetical protein.
 
 
 0.831
Pnap_3007
PFAM: Pyrrolo-quinoline quinone; KEGG: reu:Reut_B5419 pyrrolo-quinoline quinone.
 
  
 0.824
Pnap_2637
PFAM: FMN-binding domain protein; KEGG: sil:SPO1521 regulatory protein, putative.
 
  
 0.820
Pnap_4045
PFAM: domain of unknown function DUF1745; KEGG: bte:BTH_II0732 hypothetical protein.
 
    0.820
Pnap_3961
KEGG: sil:SPO1521 regulatory protein, putative.
 
  
 0.813
Pnap_0724
KEGG: dar:Daro_1025 hypothetical protein.
 
   
 0.806
Pnap_0725
PFAM: beta-lactamase domain protein; KEGG: pfl:PFL_2220 hydrolase, putative.
 
     0.783
Pnap_0722
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: pfl:PFL_2209 hypothetical protein; TC 3.A.1.4.-.
 
     0.778
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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