STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0758KEGG: pol:Bpro_1327 hypothetical protein. (167 aa)    
Predicted Functional Partners:
Pnap_0759
KEGG: rfr:Rfer_0539 hypothetical protein.
  
 
 0.980
Pnap_0756
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: pol:Bpro_1329 type II and III secretion system protein.
  
  
 0.893
Pnap_0757
KEGG: rfr:Rfer_0541 putative general secretory pathway N transmembrane protein.
     
 0.860
Pnap_0760
PFAM: General secretion pathway protein K; KEGG: pol:Bpro_1325 general secretion pathway protein K.
  
  
 0.844
Pnap_0764
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rfr:Rfer_0534 general secretion pathway protein G.
  
  
 0.822
Pnap_0754
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: rfr:Rfer_0544 general secretion pathway protein F.
  
  
 0.819
Pnap_0761
KEGG: rfr:Rfer_0537 methylation.
  
  
 0.807
Pnap_0762
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: pol:Bpro_1323 general secretion pathway protein I.
  
  
 0.804
Pnap_0755
KEGG: rfr:Rfer_0543 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase.
  
  
 0.798
Pnap_0763
TIGRFAM: general secretion pathway protein H; KEGG: rfr:Rfer_0535 general secretion pathway protein H.
  
  
 0.798
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.