STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0850PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_1148 ABC transporter related; Belongs to the ABC transporter superfamily. (365 aa)    
Predicted Functional Partners:
Pnap_0851
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1149 binding-protein-dependent transport systems inner membrane component.
 
 0.986
Pnap_1610
PFAM: extracellular solute-binding protein, family 1; KEGG: pol:Bpro_3092 extracellular solute-binding protein, family 1.
 
 
 0.967
Pnap_2040
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.719
Pnap_2860
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0354 binding-protein-dependent transport systems inner membrane component.
 
 0.652
Pnap_3270
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1009 binding-protein-dependent transport systems inner membrane component.
 
 0.636
Pnap_2634
Transcriptional regulator, Fis family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0596 binding-protein-dependent transport systems inner membrane component.
  
 0.613
Pnap_1544
Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     0.609
Pnap_2633
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0595 binding-protein-dependent transport systems inner membrane component.
 
 0.600
Pnap_2859
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0355 binding-protein-dependent transport systems inner membrane component.
  
 0.581
Pnap_3271
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1008 binding-protein-dependent transport systems inner membrane component.
 
  
 0.545
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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