STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0921Multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; CHASE3 domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: pol:Bpro_0880 multi-sensor signal transduction histidine kinase. (446 aa)    
Predicted Functional Partners:
Pnap_0922
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: pol:Bpro_0881 two component transcriptional regulator, LuxR family.
 
 0.924
Pnap_0790
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pol:Bpro_4296 two component transcriptional regulator, LuxR family.
 
 0.844
Pnap_1851
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pol:Bpro_2543 two component transcriptional regulator, LuxR family.
 
 
 0.844
Pnap_3523
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bcn:Bcen_5187 two component transcriptional regulator, LuxR family.
 
 0.844
Pnap_3628
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pol:Bpro_2543 two component transcriptional regulator, LuxR family.
 
 
 0.844
Pnap_2640
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bja:blr5281 two-component response regulator.
 
 0.843
Pnap_3597
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bja:blr5281 two-component response regulator.
 
 0.843
Pnap_4084
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; KEGG: rso:RSc3161 probable two component response regulator transcription regulator protein.
 
 
 0.842
Pnap_0105
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: corR; DNA-binding response regulator CorR.
 
 
 0.841
Pnap_3764
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pol:Bpro_4598 two component transcriptional regulator, LuxR family.
 
 0.841
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.