STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_0958KEGG: pol:Bpro_0907 hypothetical protein. (72 aa)    
Predicted Functional Partners:
Pnap_0957
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
    0.756
Pnap_2198
KEGG: pol:Bpro_2260 hypothetical protein.
  
     0.723
Pnap_0783
KEGG: pol:Bpro_0862 hypothetical protein.
  
     0.662
Pnap_0438
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
  
     0.649
Pnap_0301
KEGG: pol:Bpro_0444 hypothetical protein.
  
     0.647
Pnap_0175
PFAM: Rod shape-determining protein MreD; KEGG: pol:Bpro_0224 putative rod shape-determining MreD transmembrane protein.
  
     0.628
cobD
Conserved hypothetical protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
  
     0.602
Pnap_3631
KEGG: pol:Bpro_4435 putative proline rich signal peptide protein.
  
     0.598
Pnap_3712
KEGG: pol:Bpro_4483 protein of unknown function DUF132.
  
     0.574
priB
Putative primosomal replication protein; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
  
     0.573
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.