STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1020PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bbr:BB1109 FMN-dependent dehydrogenase. (372 aa)    
Predicted Functional Partners:
Pnap_1023
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: bur:Bcep18194_A5914 benzoylformate decarboxylase; Belongs to the TPP enzyme family.
  
 
 0.949
Pnap_3472
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.717
Pnap_1021
PFAM: Uncharacterized protein UPF0065; KEGG: pol:Bpro_3347 uncharacterized protein UPF0065.
       0.668
Pnap_0778
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: pol:Bpro_0858 FAD linked oxidase-like.
  
 0.603
Pnap_1019
PFAM: Uncharacterized protein UPF0065; KEGG: reu:Reut_A0842 hypothetical protein.
       0.563
Pnap_1022
PFAM: aldehyde dehydrogenase; KEGG: bja:blr6417 vanillin: NAD oxidoreductase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.520
Pnap_0461
KEGG: pol:Bpro_4174 aminotransferase, class V.
  
 0.424
Pnap_0463
KEGG: pol:Bpro_4174 aminotransferase, class V.
  
 0.424
Pnap_3617
PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase, FAD-binding; KEGG: pol:Bpro_0593 NADH:flavin oxidoreductase/NADH oxidase.
  
  
 0.408
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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