STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1041PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: pol:Bpro_1488 protein of unknown function DUF1228. (428 aa)    
Predicted Functional Partners:
Pnap_1040
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
  
  
 0.733
Pnap_3342
KEGG: rfr:Rfer_3961 hypothetical protein.
  
     0.506
Pnap_1042
Hypothetical protein.
       0.496
Pnap_1039
PFAM: basic membrane lipoprotein; KEGG: pol:Bpro_1486 basic membrane lipoprotein.
     
 0.476
Pnap_2199
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pol:Bpro_2259 MATE efflux family protein.
 
  
 0.457
Pnap_3231
TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Pi-cotransporter; KEGG: pol:Bpro_3851 Na/Pi cotransporter II-related.
  
     0.453
Pnap_0831
KEGG: pol:Bpro_0933 hypothetical protein.
  
     0.403
Pnap_2194
DNA helicase/exodeoxyribonuclease V, subunit B; KEGG: pol:Bpro_2264 RecB family exonuclease-like.
  
     0.402
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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