STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1128PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; O-methyltransferase, family 3; Methyltransferase type 11; KEGG: pol:Bpro_1666 protein-L-isoaspartate(D-aspartate) O-methyltransferase. (229 aa)    
Predicted Functional Partners:
Pnap_2186
Erythromycin esterase; PFAM: phosphoribosyltransferase; Erythromycin esterase; KEGG: pol:Bpro_2391 erythromycin esterase.
      0.902
Pnap_1127
SMART: Rhodanese domain protein; KEGG: pol:Bpro_1665 rhodanese-like.
       0.767
Pnap_2019
PFAM: ATP dependent DNA ligase; KEGG: pol:Bpro_2416 ATP dependent DNA ligase.
 
  
 0.652
Pnap_1126
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_1664 type I secretion outer membrane protein, TolC.
     
 0.590
Pnap_1129
PFAM: regulatory protein, TetR; KEGG: pol:Bpro_1669 transcriptional regulator, TetR family.
   
   0.573
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
   
    0.470
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.