STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1291PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pol:Bpro_0102 alcohol dehydrogenase, zinc-binding. (333 aa)    
Predicted Functional Partners:
Pnap_3073
[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: pol:Bpro_3648 malonyl CoA-acyl carrier protein transacylase.
 
    
 0.903
Pnap_2672
3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: beta-ketoacyl synthase; KEGG: dar:Daro_4170 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.901
Pnap_3070
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.901
Pnap_1371
PFAM: beta-ketoacyl synthase; KEGG: tbd:Tbd_2753 3-oxoacyl-(acyl carrier protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.899
Pnap_2931
PFAM: Pirin domain protein domain protein; Cupin 2, conserved barrel domain protein; KEGG: pol:Bpro_2901 pirin-like; Belongs to the pirin family.
    
 0.760
Pnap_1292
KEGG: pol:Bpro_0106 short-chain dehydrogenase/reductase SDR.
 
   
 0.629
Pnap_0952
PFAM: acyl transferase domain protein; KEGG: reu:Reut_B4931 acyl transferase region.
 
    
 0.585
Pnap_1290
PFAM: short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR; KEGG: pol:Bpro_0101 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.565
Pnap_1209
PFAM: Alkaline phosphatase; KEGG: hch:HCH_01191 phosphodiesterase/alkaline phosphatase D.
 
      0.487
Pnap_1293
PFAM: regulatory protein, TetR; KEGG: pol:Bpro_0107 transcriptional regulator, TetR family.
 
   
 0.459
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.