STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1449PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6583 FAD dependent oxidoreductase. (434 aa)    
Predicted Functional Partners:
Pnap_1451
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dar:Daro_0492 cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.993
Pnap_1450
PFAM: protein of unknown function DUF1365; KEGG: cvi:CV3225 hypothetical protein.
  
 0.985
Pnap_1454
KEGG: dar:Daro_0495 lipoprotein, putative.
 
   
 0.945
Pnap_1175
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_3190 cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.943
Pnap_1455
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: dar:Daro_0496 short-chain dehydrogenase/reductase SDR.
 
   
 0.940
Pnap_1456
KEGG: dar:Daro_0497 hypothetical protein.
 
   
 0.932
Pnap_1453
KEGG: dar:Daro_0494 major facilitator superfamily MFS_1.
 
   
 0.926
Pnap_1452
KEGG: hypothetical protein.
 
     0.912
Pnap_0880
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: pol:Bpro_1247 cytochrome c oxidase assembly protein CtaG/Cox11.
 
      0.837
Pnap_1457
Lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
 
     0.734
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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