STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1590Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_3110 GntR-like. (273 aa)    
Predicted Functional Partners:
Pnap_0602
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: nar:Saro_0179 transcriptional regulator, GntR family.
 
  
 0.761
Pnap_2466
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: transcriptional regulator, GntR family.
 
  
 0.759
Pnap_2731
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_3386 transcriptional regulator, GntR family.
 
  
 0.715
Pnap_3272
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_1007 transcriptional regulator, GntR family.
 
  
 0.655
Pnap_2029
PFAM: amidohydrolase 2; KEGG: rfr:Rfer_0332 amidohydrolase 2.
      0.619
Pnap_1591
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pol:Bpro_3109 NAD-dependent epimerase/dehydratase.
 
     0.617
Pnap_1592
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pol:Bpro_3108 senescence marker protein-30 (SMP-30).
 
   
 0.611
Pnap_1596
PFAM: dihydrodipicolinate synthetase; KEGG: 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
   
 0.610
Pnap_1700
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bja:blr0382 transcriptional regulatory protein.
 
  
 0.607
Pnap_1548
PFAM: amidohydrolase 2; KEGG: bja:blr2258 putative 2-pyrone-4,6-dicarbaxylate hydrolase.
     0.496
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.