STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1612TIGRFAM: phasin family protein; KEGG: pol:Bpro_3088 phasin. (180 aa)    
Predicted Functional Partners:
Pnap_1780
KEGG: pol:Bpro_2673 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
     0.769
Pnap_0647
KEGG: pol:Bpro_0746 outer membrane protein (porin)-like.
  
     0.756
Pnap_1475
KEGG: pol:Bpro_1726 hypothetical protein.
  
     0.743
Pnap_1713
PFAM: RDD domain containing protein; KEGG: pol:Bpro_2313 hypothetical protein.
  
     0.723
Pnap_2198
KEGG: pol:Bpro_2260 hypothetical protein.
  
     0.714
Pnap_2782
KEGG: pol:Bpro_1805 putative transmembrane protein.
  
     0.705
Pnap_0804
KEGG: pol:Bpro_3117 porin, gram-negative type.
  
     0.697
Pnap_2770
KEGG: pol:Bpro_1829 membrane protein-like.
  
     0.685
Pnap_0783
KEGG: pol:Bpro_0862 hypothetical protein.
  
     0.670
Pnap_2768
KEGG: pol:Bpro_1834 hypothetical protein.
  
     0.664
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.