STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1642KEGG: nmu:Nmul_A2433 hypothetical protein. (459 aa)    
Predicted Functional Partners:
Pnap_1643
PFAM: glycosyl transferase, group 1; KEGG: nmu:Nmul_A2434 glycosyl transferase, group 1.
 
   
 0.962
Pnap_1647
KEGG: nmu:Nmul_A2432 putative signal peptide protein.
 
   
 0.879
Pnap_1644
KEGG: pfl:PFL_2976 hypothetical protein.
     
 0.841
Pnap_1645
KEGG: pau:PA14_24510 hypothetical protein.
     
 0.830
Pnap_1641
Hypothetical protein.
       0.752
Pnap_1640
KEGG: rxy:Rxyl_2670 hypothetical protein.
 
     0.673
Pnap_1646
KEGG: nmu:Nmul_A2441 hypothetical protein.
     
 0.564
Pnap_1639
Hypothetical protein.
       0.536
Pnap_1638
KEGG: rxy:Rxyl_2670 hypothetical protein.
 
     0.421
Pnap_3735
KEGG: bxe:Bxe_A2968 hypothetical protein.
 
     0.402
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.