STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1705KEGG: pol:Bpro_2302 hypothetical protein. (284 aa)    
Predicted Functional Partners:
Pnap_0614
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_B5807 glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.568
Pnap_3510
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: pol:Bpro_4042 protein of unknown function UPF0089.
  
     0.526
Pnap_3494
Male sterility C-terminal domain protein; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KR; KEGG: pol:Bpro_4023 male sterility-like.
  
     0.497
Pnap_1706
KEGG: pol:Bpro_2305 hypothetical protein.
       0.493
Pnap_1708
PFAM: protein of unknown function DUF482; KEGG: pol:Bpro_2308 protein of unknown function DUF482.
       0.488
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
     0.451
Pnap_3594
PFAM: PGAP1 family protein; KEGG: rfr:Rfer_3545 PGAP1-like.
  
   
 0.444
Pnap_1707
KEGG: pol:Bpro_2307 hypothetical protein.
       0.424
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.