STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1744KEGG: bja:blr1916 putative transposase. (451 aa)    
Predicted Functional Partners:
Pnap_1745
Transposase; KEGG: mac:MA0437 transposase.
       0.551
Pnap_2901
Transposase; KEGG: mma:MM3344 transposase.
  
     0.536
Pnap_2997
Transposase; KEGG: mma:MM3344 transposase.
  
     0.536
Pnap_4008
Transposase; KEGG: mma:MM3344 transposase.
  
     0.536
Pnap_1211
KEGG: tdn:Tmden_0240 conserved hypothetical protein, putative DNA helicase.
  
    0.487
Pnap_2900
Transposase; KEGG: mma:MM3343 transposase.
  
     0.479
Pnap_2996
Transposase; KEGG: mma:MM3343 transposase.
  
     0.479
Pnap_4009
Transposase; KEGG: mma:MM3343 transposase.
  
     0.479
Pnap_2899
KEGG: eba:p1B295 N6 adenine-specific DNA methyltransferase protein, N12 class.
  
  
 0.476
Pnap_2902
KEGG: eba:p1B295 N6 adenine-specific DNA methyltransferase protein, N12 class.
  
  
 0.476
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.