STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1832PFAM: BolA family protein; KEGG: pol:Bpro_2584 BolA-like protein; Belongs to the BolA/IbaG family. (99 aa)    
Predicted Functional Partners:
Pnap_0773
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: pol:Bpro_0848 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.919
Pnap_4060
PFAM: glutaredoxin; KEGG: rfr:Rfer_0010 glutaredoxin.
 
 
 0.878
Pnap_1831
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pol:Bpro_2585 PpiC-type peptidyl-prolyl cis-trans isomerase.
  
    0.696
Pnap_1833
TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: noc:Noc_2198 transposase, IS605 OrfB.
       0.540
Pnap_0929
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 
 0.487
Pnap_2791
KEGG: pol:Bpro_1794 hypothetical protein.
  
    0.477
Pnap_0693
PFAM: BolA family protein; KEGG: pol:Bpro_0801 BolA-like protein; Belongs to the BolA/IbaG family.
 
   
 0.470
Pnap_1177
PFAM: protein of unknown function DUF455; KEGG: pol:Bpro_3189 protein of unknown function DUF455.
  
     0.457
Pnap_2233
PFAM: protein of unknown function DUF498; KEGG: pol:Bpro_2188 protein of unknown function DUF498.
  
     0.442
Pnap_0325
PFAM: Ferritin, Dps family protein; KEGG: ana:all4145 probable DNA-binding stress protein; Belongs to the Dps family.
   
    0.433
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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