STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_1849PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_2562 GCN5-related N-acetyltransferase. (149 aa)    
Predicted Functional Partners:
Pnap_1848
KEGG: pol:Bpro_2563 putative glutathione S-transferase-related protein.
       0.778
Pnap_1847
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: pol:Bpro_2564 acyl-CoA dehydrogenase-like.
       0.668
Pnap_1846
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pol:Bpro_2565 alcohol dehydrogenase, zinc-binding.
       0.633
Pnap_1845
TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: pol:Bpro_2566 phenylacetic acid degradation-related protein.
     
 0.430
Pnap_1844
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: pol:Bpro_2567 short-chain dehydrogenase/reductase SDR.
       0.410
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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