STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2222TIGRFAM: putative addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: rfr:Rfer_3405 transcriptional regulator/antitoxin, MazE. (74 aa)    
Predicted Functional Partners:
Pnap_2223
TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rfr:Rfer_3404 death-on-curing protein.
 
   
 0.961
Pnap_2220
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rfr:Rfer_0490 heat shock protein DnaJ-like.
       0.515
Pnap_2221
KEGG: dar:Daro_2064 bacterial regulatory proteins, MerR family.
       0.515
Pnap_2224
PFAM: Allergen V5/Tpx-1 family protein; KEGG: rfr:Rfer_4490 allergen V5/TPX-1 related.
       0.496
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.