STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2245KEGG: eba:ebA7239 hypothetical protein. (393 aa)    
Predicted Functional Partners:
Pnap_2241
KEGG: mca:MCA2677 hypothetical protein.
       0.798
Pnap_2242
KEGG: mca:MCA2676 hypothetical protein.
       0.798
Pnap_2243
KEGG: rso:RSc0878 hypothetical protein.
       0.798
Pnap_2244
KEGG: mca:MCA2674 hypothetical protein.
       0.798
Pnap_2239
PFAM: glycoside hydrolase, family 24; KEGG: nmu:Nmul_A1445 glycoside hydrolase, family 24.
       0.779
Pnap_2238
Hypothetical protein.
       0.773
Pnap_2240
Hypothetical protein.
       0.773
Pnap_2246
KEGG: rso:RSc0875 putative transmembrane protein.
       0.734
Pnap_2247
KEGG: dps:DP1592 hypothetical protein.
       0.734
Pnap_2248
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: sas:SAS0944 hypothetical protein.
       0.652
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.