STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2256Hypothetical protein. (117 aa)    
Predicted Functional Partners:
Pnap_2257
PFAM: phage terminase GpA; KEGG: hch:HCH_02894 bacteriophage tail assembly protein.
       0.773
Pnap_2258
Hypothetical protein; KEGG: hch:HCH_02893 phage DNA packaging protein, Nu1 subunit of terminase.
       0.773
Pnap_2255
KEGG: eci:UTI89_C5118 hypothetical protein.
       0.613
Pnap_2254
TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein, lambda; KEGG: xfa:XF0510 hypothetical protein.
       0.612
Pnap_2259
KEGG: xfa:XF0515 hypothetical protein.
       0.497
Pnap_2260
Hypothetical protein; KEGG: bbr:BB1683 phage-related hypothetical protein.
       0.497
Pnap_2261
Hypothetical protein.
       0.497
Pnap_2253
PFAM: peptidase S14, ClpP; KEGG: stm:STM0912 ATP-dependent protease; Belongs to the peptidase S14 family.
       0.430
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.